R/sim2.2018HN.R
sim2.2018HN.Rd
Given a multivariate sample \(X\), hypothesized mean \(\mu_0\) and covariance \(\Sigma_0\), it tests $$H_0 : \mu_x = \mu_y \textrm{ and } \Sigma_x = \Sigma_y \quad vs\quad H_1 : \textrm{ not } H_0$$ using the procedure by Hyodo and Nishiyama (2018) in a similar fashion to that of Liu et al. (2017) for one-sample test.
sim2.2018HN(X, Y)
an \((n_x \times p)\) data matrix of 1st sample.
an \((n_y \times p)\) data matrix of 2nd sample.
a (list) object of S3
class htest
containing:
a test statistic.
\(p\)-value under \(H_0\).
alternative hypothesis.
name of the test.
name(s) of provided sample data.
Hyodo M, Nishiyama T (2018). “A simultaneous testing of the mean vector and the covariance matrix among two populations for high-dimensional data.” TEST, 27(3), 680--699. ISSN 1133-0686, 1863-8260.
## CRAN-purpose small example
smallX = matrix(rnorm(10*3),ncol=3)
smallY = matrix(rnorm(10*3),ncol=3)
sim2.2018HN(smallX, smallY) # run the test
#>
#> Two-sample Simultaneous Test of Means and Covariances by Hyodo and
#> Nishiyama (2018)
#>
#> data: smallX and smallY
#> T = -1.2483, p-value = 0.8113
#> alternative hypothesis: both means and covariances are not equal.
#>
# \donttest{
## empirical Type 1 error
niter = 1000
counter = rep(0,niter) # record p-values
for (i in 1:niter){
X = matrix(rnorm(121*10), ncol=10)
Y = matrix(rnorm(169*10), ncol=10)
counter[i] = ifelse(sim2.2018HN(X,Y)$p.value < 0.05, 1, 0)
}
## print the result
cat(paste("\n* Example for 'sim2.2018HN'\n","*\n",
"* number of rejections : ", sum(counter),"\n",
"* total number of trials : ", niter,"\n",
"* empirical Type 1 error : ",round(sum(counter/niter),5),"\n",sep=""))
#>
#> * Example for 'sim2.2018HN'
#> *
#> * number of rejections : 62
#> * total number of trials : 1000
#> * empirical Type 1 error : 0.062
# }